Re-run this search with the SEG filter switched off
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= CLUG_01731
(277 letters)
Database: Seq/AA.fsa
85,676 sequences; 40,655,052 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
CLUG_01731 c2 (1012919..1013752) [834 bp, 277 aa] 520 0.0 DEHA2E04906g Chr5 (404523..409532) [5010 bp, 1669 aa] similar to... 493 e-163 CTRG_02909 c3 (1951825..1956846) [5022 bp, 1673 aa] 491 e-161 orf19.3496 Chr6 (438049..443028) [4980 bp, 1659 aa] Predicted OR... 489 e-161 CD36_62280 Chr6 (451740..456755) [5016 bp, 1671 aa] Similar to ... 489 e-161 CAWG_05155 c7 complement(600451..605466) [5016 bp, 1671 aa] 489 e-161 PICST_72214 Chr5 complement(458912..463918) [5007 bp, 1668 aa] p... 484 e-159 SPAPADRAFT_143892 c7 complement(401145..406163) [5019 bp, 1672 aa] 483 e-159 CANTEDRAFT_106122 c18 complement(272263..277260) [4998 bp, 1665 ... 478 e-157 PGUG_02634 c3 complement(592549..597537) [4989 bp, 1662 aa] 477 e-157 LELG_04774 c7 (441540..446570) [5031 bp, 1676 aa] 469 e-154 CORT0F03210 c6 complement(662221..667128) [4908 bp, 1635 aa] S. ... 461 e-151 CPAR2_602230 Chr6 complement(521493..526400) [4908 bp, 1635 aa] ... 459 e-150 YGL206C Chr7 complement(102547..107508) [4962 bp, 1653 aa] Clath... 380 e-121 CPAR2_406880 Chr4 complement(1541922..1542659) [738 bp, 245 aa] ... 31 2.2 CTRG_05810 c10 complement(62052..64796) [2745 bp, 914 aa] 31 2.9 YCR093W Chr3 (280114..286440) [6327 bp, 2108 aa] Component of th... 31 3.2 CTRG_00917 c1 (2069681..2071888) [2208 bp, 735 aa] 30 4.0
>CLUG_01731 c2 (1012919..1013752) [834 bp, 277 aa]
Length = 277
Score = 520 bits (1340), Expect = 0.0, Method: Compositional matrix adjust. Identities = 258/277 (93%), Positives = 258/277 (93%)
Query: 1 MFSHYDKPSIGKLCEKSGLFQRALEHYDDLKDIKRVVVHTNVLPNDWLVSYFGQLNVQQS 60
MFSHYDKPSIGKLCEKSGLFQRALEHYDDLKDIKRVVVHTNVLPNDWLVSYFGQLNVQQS
Sbjct: 1 MFSHYDKPSIGKLCEKSGLFQRALEHYDDLKDIKRVVVHTNVLPNDWLVSYFGQLNVQQS 60
Query: 61 MACXXXXXXXXXXXXXXXXXXXATKYSDLLGPLNLIKLFETYKCNEGKYYYLSSIVNLTQ 120
MAC ATKYSDLLGPLNLIKLFETYKCNEGKYYYLSSIVNLTQ
Sbjct: 61 MACLNELLSNNIQQNLQVVIQVATKYSDLLGPLNLIKLFETYKCNEGKYYYLSSIVNLTQ 120
Query: 121 DPDVVFKYIEAAAKMNQTKEIERVVRDNNVYNGEKVKNFLKEFKLDDQLPLIIVCDRFNF 180
DPDVVFKYIEAAAKMNQTKEIERVVRDNNVYNGEKVKNFLKEFKLDDQLPLIIVCDRFNF
Sbjct: 121 DPDVVFKYIEAAAKMNQTKEIERVVRDNNVYNGEKVKNFLKEFKLDDQLPLIIVCDRFNF 180
Query: 181 VHDLILYLYKNQYFKFIEVYVQQVNPANTPQVVAGLLDVDCDENIIKGLLMSVLGRVPLK 240
VHDLILYLYKNQYFKFIEVYVQQVNPANTPQVVAGLLDVDCDENIIKGLLMSVLGRVPLK
Sbjct: 181 VHDLILYLYKNQYFKFIEVYVQQVNPANTPQVVAGLLDVDCDENIIKGLLMSVLGRVPLK 240
Query: 241 ELVQEVEKRNRLKIVLPFLEKTLEGGSTDQEVYNTLG 277
ELVQEVEKRNRLKIVLPFLEKTLEGGSTDQEVYNTLG
Sbjct: 241 ELVQEVEKRNRLKIVLPFLEKTLEGGSTDQEVYNTLG 277
>DEHA2E04906g Chr5 (404523..409532) [5010 bp, 1669 aa] similar to uniprot|P22137
Saccharomyces cerevisiae YGL206C CHC1 vesicle coat
protein
Length = 1669
Score = 493 bits (1270), Expect = e-163, Method: Compositional matrix adjust. Identities = 237/277 (85%), Positives = 252/277 (90%)
Query: 1 MFSHYDKPSIGKLCEKSGLFQRALEHYDDLKDIKRVVVHTNVLPNDWLVSYFGQLNVQQS 60
MFSHYDKP+IGKLCEKSGLFQRALEHYDDLKDIKRVVVHTNVLPNDWLV+YFGQLNVQQS
Sbjct: 606 MFSHYDKPTIGKLCEKSGLFQRALEHYDDLKDIKRVVVHTNVLPNDWLVAYFGQLNVQQS 665
Query: 61 MACXXXXXXXXXXXXXXXXXXXATKYSDLLGPLNLIKLFETYKCNEGKYYYLSSIVNLTQ 120
+AC ATKYSDL+GPL LIK+FE YKCNEG YYYLSSIVNLTQ
Sbjct: 666 VACLKELLSNNIQQNLQIVIQVATKYSDLIGPLTLIKIFEDYKCNEGAYYYLSSIVNLTQ 725
Query: 121 DPDVVFKYIEAAAKMNQTKEIERVVRDNNVYNGEKVKNFLKEFKLDDQLPLIIVCDRFNF 180
DPDVVFKYI+ AAKMNQTKEIERVVRDNNVYNGEKVKNFLKEFKL+DQLPLIIVCDRFNF
Sbjct: 726 DPDVVFKYIQCAAKMNQTKEIERVVRDNNVYNGEKVKNFLKEFKLEDQLPLIIVCDRFNF 785
Query: 181 VHDLILYLYKNQYFKFIEVYVQQVNPANTPQVVAGLLDVDCDENIIKGLLMSVLGRVPLK 240
VHDLILYLYKN+YFKFIEVYVQQVNP+NTPQV+AGLLDVDCDENIIKGLL+SVLGR+P+K
Sbjct: 786 VHDLILYLYKNKYFKFIEVYVQQVNPSNTPQVIAGLLDVDCDENIIKGLLISVLGRIPIK 845
Query: 241 ELVQEVEKRNRLKIVLPFLEKTLEGGSTDQEVYNTLG 277
ELV EVEKRNRLKI+LPFLEKTLEGGSTDQEV+NTL
Sbjct: 846 ELVSEVEKRNRLKILLPFLEKTLEGGSTDQEVFNTLA 882
>CTRG_02909 c3 (1951825..1956846) [5022 bp, 1673 aa]
Length = 1673
Score = 491 bits (1263), Expect = e-161, Method: Compositional matrix adjust. Identities = 237/277 (85%), Positives = 249/277 (89%)
Query: 1 MFSHYDKPSIGKLCEKSGLFQRALEHYDDLKDIKRVVVHTNVLPNDWLVSYFGQLNVQQS 60
MFSHYDKP+IGKLCEKSGLFQRALEHYDDLKDIKRV+VHTNVLP+DWLVSYFGQLNV+QS
Sbjct: 606 MFSHYDKPTIGKLCEKSGLFQRALEHYDDLKDIKRVIVHTNVLPSDWLVSYFGQLNVEQS 665
Query: 61 MACXXXXXXXXXXXXXXXXXXXATKYSDLLGPLNLIKLFETYKCNEGKYYYLSSIVNLTQ 120
+AC ATKYS+L+GP+ LIKLFE YKC EG YYYLSSIVNLTQ
Sbjct: 666 LACLKELLSQNVQQNLQVIIQVATKYSELIGPMKLIKLFEEYKCTEGLYYYLSSIVNLTQ 725
Query: 121 DPDVVFKYIEAAAKMNQTKEIERVVRDNNVYNGEKVKNFLKEFKLDDQLPLIIVCDRFNF 180
DPDVVFKYI+AAAKMNQTKEIERVVRDNNVYNGEKVKNFLKEFKLDDQLPLIIVCDRFNF
Sbjct: 726 DPDVVFKYIQAAAKMNQTKEIERVVRDNNVYNGEKVKNFLKEFKLDDQLPLIIVCDRFNF 785
Query: 181 VHDLILYLYKNQYFKFIEVYVQQVNPANTPQVVAGLLDVDCDENIIKGLLMSVLGRVPLK 240
VHDLILYLYKNQYFKFIEVYVQ VNP NTPQVVAGLLDVDCDE IIKGLLMSVLGRVP+K
Sbjct: 786 VHDLILYLYKNQYFKFIEVYVQSVNPTNTPQVVAGLLDVDCDEEIIKGLLMSVLGRVPIK 845
Query: 241 ELVQEVEKRNRLKIVLPFLEKTLEGGSTDQEVYNTLG 277
ELV+EVEKRNRLKI+LPFLEKTLEGGS DQEVYNTL
Sbjct: 846 ELVEEVEKRNRLKILLPFLEKTLEGGSNDQEVYNTLA 882
>orf19.3496 Chr6 (438049..443028) [4980 bp, 1659 aa] Predicted ORF in
Assemblies 19, 20 and 21
Length = 1659
Score = 489 bits (1260), Expect = e-161, Method: Compositional matrix adjust. Identities = 237/277 (85%), Positives = 248/277 (89%)
Query: 1 MFSHYDKPSIGKLCEKSGLFQRALEHYDDLKDIKRVVVHTNVLPNDWLVSYFGQLNVQQS 60
MFSHYDKP+IGKLCEKSGLFQRALEHYDDLKDIKRV+VHTNVLP+DWLVSYFGQLNV QS
Sbjct: 606 MFSHYDKPTIGKLCEKSGLFQRALEHYDDLKDIKRVIVHTNVLPSDWLVSYFGQLNVDQS 665
Query: 61 MACXXXXXXXXXXXXXXXXXXXATKYSDLLGPLNLIKLFETYKCNEGKYYYLSSIVNLTQ 120
+AC ATKYSDL+G LIK+FE YKC EG YYYLSSIVNLTQ
Sbjct: 666 VACIKELLSNNMQQNLQVVIQVATKYSDLIGAAKLIKIFEEYKCTEGLYYYLSSIVNLTQ 725
Query: 121 DPDVVFKYIEAAAKMNQTKEIERVVRDNNVYNGEKVKNFLKEFKLDDQLPLIIVCDRFNF 180
DPDVVFKYI+AAA+MNQTKEIERVVRDNNVYNGEKVKNFLKEFKLDDQLPLIIVCDRFNF
Sbjct: 726 DPDVVFKYIQAAARMNQTKEIERVVRDNNVYNGEKVKNFLKEFKLDDQLPLIIVCDRFNF 785
Query: 181 VHDLILYLYKNQYFKFIEVYVQQVNPANTPQVVAGLLDVDCDENIIKGLLMSVLGRVPLK 240
VHDLILYLYKNQYFKFIEVYVQ VNPANTPQVVAGLLDVDCDENIIKGLLMSVLGRVP+K
Sbjct: 786 VHDLILYLYKNQYFKFIEVYVQSVNPANTPQVVAGLLDVDCDENIIKGLLMSVLGRVPIK 845
Query: 241 ELVQEVEKRNRLKIVLPFLEKTLEGGSTDQEVYNTLG 277
ELV+EVEKRNRLKI+LPFLEKTLEGGS DQEVYNTL
Sbjct: 846 ELVEEVEKRNRLKILLPFLEKTLEGGSNDQEVYNTLA 882
>CD36_62280 Chr6 (451740..456755) [5016 bp, 1671 aa] Similar to S. cerevisiae
CHC1; In S. cerevisiae: clathrin heavy chain,subunit of
the major coat protein involved in intracellular protein
transport and endocytosis; two heavy chains form the
clathrin triskelion structural component; the light
chain (CLC1) is thought to regulate function
Length = 1671
Score = 489 bits (1259), Expect = e-161, Method: Compositional matrix adjust. Identities = 237/277 (85%), Positives = 248/277 (89%)
Query: 1 MFSHYDKPSIGKLCEKSGLFQRALEHYDDLKDIKRVVVHTNVLPNDWLVSYFGQLNVQQS 60
MFSHYDKP+IGKLCEKSGLFQRALEHYDDLKDIKRV+VHTNVLP+DWLVSYFGQLNV QS
Sbjct: 606 MFSHYDKPTIGKLCEKSGLFQRALEHYDDLKDIKRVIVHTNVLPSDWLVSYFGQLNVDQS 665
Query: 61 MACXXXXXXXXXXXXXXXXXXXATKYSDLLGPLNLIKLFETYKCNEGKYYYLSSIVNLTQ 120
+AC ATKYSDL+G LIK+FE YKC EG YYYLSSIVNLTQ
Sbjct: 666 VACIKELLSNNMQQNLQVVIQVATKYSDLIGAAKLIKIFEEYKCTEGLYYYLSSIVNLTQ 725
Query: 121 DPDVVFKYIEAAAKMNQTKEIERVVRDNNVYNGEKVKNFLKEFKLDDQLPLIIVCDRFNF 180
DPDVVFKYI+AAA+MNQTKEIERVVRDNNVYNGEKVKNFLKEFKLDDQLPLIIVCDRFNF
Sbjct: 726 DPDVVFKYIQAAARMNQTKEIERVVRDNNVYNGEKVKNFLKEFKLDDQLPLIIVCDRFNF 785
Query: 181 VHDLILYLYKNQYFKFIEVYVQQVNPANTPQVVAGLLDVDCDENIIKGLLMSVLGRVPLK 240
VHDLILYLYKNQYFKFIEVYVQ VNPANTPQVVAGLLDVDCDENIIKGLLMSVLGRVP+K
Sbjct: 786 VHDLILYLYKNQYFKFIEVYVQSVNPANTPQVVAGLLDVDCDENIIKGLLMSVLGRVPIK 845
Query: 241 ELVQEVEKRNRLKIVLPFLEKTLEGGSTDQEVYNTLG 277
ELV+EVEKRNRLKI+LPFLEKTLEGGS DQEVYNTL
Sbjct: 846 ELVEEVEKRNRLKILLPFLEKTLEGGSNDQEVYNTLA 882
>CAWG_05155 c7 complement(600451..605466) [5016 bp, 1671 aa]
Length = 1671
Score = 489 bits (1259), Expect = e-161, Method: Compositional matrix adjust. Identities = 237/277 (85%), Positives = 248/277 (89%)
Query: 1 MFSHYDKPSIGKLCEKSGLFQRALEHYDDLKDIKRVVVHTNVLPNDWLVSYFGQLNVQQS 60
MFSHYDKP+IGKLCEKSGLFQRALEHYDDLKDIKRV+VHTNVLP+DWLVSYFGQLNV QS
Sbjct: 606 MFSHYDKPTIGKLCEKSGLFQRALEHYDDLKDIKRVIVHTNVLPSDWLVSYFGQLNVDQS 665
Query: 61 MACXXXXXXXXXXXXXXXXXXXATKYSDLLGPLNLIKLFETYKCNEGKYYYLSSIVNLTQ 120
+AC ATKYSDL+G LIK+FE YKC EG YYYLSSIVNLTQ
Sbjct: 666 VACIKELLSNNMQQNLQVVIQVATKYSDLIGAAKLIKIFEEYKCTEGLYYYLSSIVNLTQ 725
Query: 121 DPDVVFKYIEAAAKMNQTKEIERVVRDNNVYNGEKVKNFLKEFKLDDQLPLIIVCDRFNF 180
DPDVVFKYI+AAA+MNQTKEIERVVRDNNVYNGEKVKNFLKEFKLDDQLPLIIVCDRFNF
Sbjct: 726 DPDVVFKYIQAAARMNQTKEIERVVRDNNVYNGEKVKNFLKEFKLDDQLPLIIVCDRFNF 785
Query: 181 VHDLILYLYKNQYFKFIEVYVQQVNPANTPQVVAGLLDVDCDENIIKGLLMSVLGRVPLK 240
VHDLILYLYKNQYFKFIEVYVQ VNPANTPQVVAGLLDVDCDENIIKGLLMSVLGRVP+K
Sbjct: 786 VHDLILYLYKNQYFKFIEVYVQSVNPANTPQVVAGLLDVDCDENIIKGLLMSVLGRVPIK 845
Query: 241 ELVQEVEKRNRLKIVLPFLEKTLEGGSTDQEVYNTLG 277
ELV+EVEKRNRLKI+LPFLEKTLEGGS DQEVYNTL
Sbjct: 846 ELVEEVEKRNRLKILLPFLEKTLEGGSNDQEVYNTLA 882
>PICST_72214 Chr5 complement(458912..463918) [5007 bp, 1668 aa] predicted
protein
Length = 1668
Score = 484 bits (1247), Expect = e-159, Method: Compositional matrix adjust. Identities = 234/277 (84%), Positives = 248/277 (89%)
Query: 1 MFSHYDKPSIGKLCEKSGLFQRALEHYDDLKDIKRVVVHTNVLPNDWLVSYFGQLNVQQS 60
MFSHYDKP+IGKLCEKSGLFQRALEHYDDLKDIKRV+VHTNVL NDWLVSYFGQLNVQQS
Sbjct: 606 MFSHYDKPTIGKLCEKSGLFQRALEHYDDLKDIKRVIVHTNVLANDWLVSYFGQLNVQQS 665
Query: 61 MACXXXXXXXXXXXXXXXXXXXATKYSDLLGPLNLIKLFETYKCNEGKYYYLSSIVNLTQ 120
+AC ATKYSDL+GPL LIK+FE YKC EG+YYYLSSIVNLTQ
Sbjct: 666 VACLKELLGSNMQQNLQVVIQVATKYSDLIGPLTLIKIFEDYKCTEGEYYYLSSIVNLTQ 725
Query: 121 DPDVVFKYIEAAAKMNQTKEIERVVRDNNVYNGEKVKNFLKEFKLDDQLPLIIVCDRFNF 180
+PDVVFKYI+AAAKMNQTKEIERVVRDNNVYNGEKVKNFLKEFKLDDQLPLIIVCDRFN+
Sbjct: 726 EPDVVFKYIQAAAKMNQTKEIERVVRDNNVYNGEKVKNFLKEFKLDDQLPLIIVCDRFNY 785
Query: 181 VHDLILYLYKNQYFKFIEVYVQQVNPANTPQVVAGLLDVDCDENIIKGLLMSVLGRVPLK 240
VHDLIL+LYKNQYFKFIEVYVQ VNPANTPQVVAGLLDVDCDE IIK LL++VLGRVP+K
Sbjct: 786 VHDLILFLYKNQYFKFIEVYVQSVNPANTPQVVAGLLDVDCDEAIIKNLLLTVLGRVPIK 845
Query: 241 ELVQEVEKRNRLKIVLPFLEKTLEGGSTDQEVYNTLG 277
ELV EVEKRNRLKI+LPFLEKTLEGGS DQEVYNTL
Sbjct: 846 ELVAEVEKRNRLKILLPFLEKTLEGGSNDQEVYNTLA 882
>SPAPADRAFT_143892 c7 complement(401145..406163) [5019 bp, 1672 aa]
Length = 1672
Score = 483 bits (1242), Expect = e-159, Method: Compositional matrix adjust. Identities = 232/277 (83%), Positives = 246/277 (88%)
Query: 1 MFSHYDKPSIGKLCEKSGLFQRALEHYDDLKDIKRVVVHTNVLPNDWLVSYFGQLNVQQS 60
MFSHYDKP+IGKLCEKSGLFQRALEHYDDLKDIKRV+VHTNVLPN+WLVSYFGQLNV QS
Sbjct: 606 MFSHYDKPTIGKLCEKSGLFQRALEHYDDLKDIKRVIVHTNVLPNEWLVSYFGQLNVDQS 665
Query: 61 MACXXXXXXXXXXXXXXXXXXXATKYSDLLGPLNLIKLFETYKCNEGKYYYLSSIVNLTQ 120
+ C ATKYSDL+GPL LIK+FE YKC EG YYYLSSIVNLTQ
Sbjct: 666 IECIKELLANNMAQNLQVVIQVATKYSDLIGPLKLIKIFEDYKCTEGLYYYLSSIVNLTQ 725
Query: 121 DPDVVFKYIEAAAKMNQTKEIERVVRDNNVYNGEKVKNFLKEFKLDDQLPLIIVCDRFNF 180
+PDVVFKYI+AAA+M QTKEIERVVRDNNVYNGE+VKNFLKEF LDDQLPLIIVCDRFNF
Sbjct: 726 EPDVVFKYIQAAARMKQTKEIERVVRDNNVYNGERVKNFLKEFPLDDQLPLIIVCDRFNF 785
Query: 181 VHDLILYLYKNQYFKFIEVYVQQVNPANTPQVVAGLLDVDCDENIIKGLLMSVLGRVPLK 240
VHDLILYLYKNQYFKFIEVYVQ VNPANTPQV+AGLLDVDCDENIIKGLLMSVLGRVP+
Sbjct: 786 VHDLILYLYKNQYFKFIEVYVQSVNPANTPQVIAGLLDVDCDENIIKGLLMSVLGRVPIG 845
Query: 241 ELVQEVEKRNRLKIVLPFLEKTLEGGSTDQEVYNTLG 277
ELV+EVEKRNRLKI+LPFLEKTLEGGS DQEVYNTL
Sbjct: 846 ELVEEVEKRNRLKILLPFLEKTLEGGSNDQEVYNTLA 882
>CANTEDRAFT_106122 c18 complement(272263..277260) [4998 bp, 1665 aa]
Length = 1665
Score = 478 bits (1230), Expect = e-157, Method: Compositional matrix adjust. Identities = 231/277 (83%), Positives = 246/277 (88%)
Query: 1 MFSHYDKPSIGKLCEKSGLFQRALEHYDDLKDIKRVVVHTNVLPNDWLVSYFGQLNVQQS 60
MFSHYDKPSIGKLCEKSGLFQRALEHYDDLKDIKRV+VHTNVLPNDWLV+YFGQL V+Q+
Sbjct: 606 MFSHYDKPSIGKLCEKSGLFQRALEHYDDLKDIKRVIVHTNVLPNDWLVAYFGQLTVEQT 665
Query: 61 MACXXXXXXXXXXXXXXXXXXXATKYSDLLGPLNLIKLFETYKCNEGKYYYLSSIVNLTQ 120
+AC ATKYSDL+GPLNLIK+FETYKC EG+YYYLSSIVNLTQ
Sbjct: 666 VACIKELLSNNMQQNLQVIIQVATKYSDLIGPLNLIKIFETYKCTEGEYYYLSSIVNLTQ 725
Query: 121 DPDVVFKYIEAAAKMNQTKEIERVVRDNNVYNGEKVKNFLKEFKLDDQLPLIIVCDRFNF 180
+PDVVFKYI+ AA+MNQ KEIERVVRDNNVYNGEKVKNFLKEFKLDDQLPLIIVCDRFNF
Sbjct: 726 EPDVVFKYIQCAARMNQPKEIERVVRDNNVYNGEKVKNFLKEFKLDDQLPLIIVCDRFNF 785
Query: 181 VHDLILYLYKNQYFKFIEVYVQQVNPANTPQVVAGLLDVDCDENIIKGLLMSVLGRVPLK 240
VHDLILYLYKNQYFKFIEVYVQQVN ANTPQVVAGLLDVDCDE IIK LL SV+GRVP+K
Sbjct: 786 VHDLILYLYKNQYFKFIEVYVQQVNSANTPQVVAGLLDVDCDETIIKNLLNSVIGRVPIK 845
Query: 241 ELVQEVEKRNRLKIVLPFLEKTLEGGSTDQEVYNTLG 277
ELV EVEKRNRLKI+LPFLE TL+GGS DQEVYNTL
Sbjct: 846 ELVVEVEKRNRLKILLPFLEATLQGGSNDQEVYNTLA 882
>PGUG_02634 c3 complement(592549..597537) [4989 bp, 1662 aa]
Length = 1662
Score = 477 bits (1228), Expect = e-157, Method: Compositional matrix adjust. Identities = 229/277 (82%), Positives = 244/277 (88%)
Query: 1 MFSHYDKPSIGKLCEKSGLFQRALEHYDDLKDIKRVVVHTNVLPNDWLVSYFGQLNVQQS 60
MFSHYDKP+IGKLCEK GLFQRALEHYDDLKDIKRV+VHTNVLPNDWLV YFGQLNVQQS
Sbjct: 605 MFSHYDKPTIGKLCEKLGLFQRALEHYDDLKDIKRVIVHTNVLPNDWLVQYFGQLNVQQS 664
Query: 61 MACXXXXXXXXXXXXXXXXXXXATKYSDLLGPLNLIKLFETYKCNEGKYYYLSSIVNLTQ 120
+AC ATKYSDL+GPL LIK+FE +KCNEG YYYLSSIVN+TQ
Sbjct: 665 VACIKELLSNNMKQNLQVVIQVATKYSDLIGPLTLIKIFEEFKCNEGLYYYLSSIVNITQ 724
Query: 121 DPDVVFKYIEAAAKMNQTKEIERVVRDNNVYNGEKVKNFLKEFKLDDQLPLIIVCDRFNF 180
DPDVV KYI+ AAKMNQ KEIERVVRDNN+YNGEKVKNFLKE KL+DQLPLIIVCDRFNF
Sbjct: 725 DPDVVLKYIQTAAKMNQAKEIERVVRDNNIYNGEKVKNFLKEAKLEDQLPLIIVCDRFNF 784
Query: 181 VHDLILYLYKNQYFKFIEVYVQQVNPANTPQVVAGLLDVDCDENIIKGLLMSVLGRVPLK 240
VHDLILYLYKN +FKFIEVYVQQVNP NTPQVVAGLLDVDCDENIIKGLL SV+GRVP+K
Sbjct: 785 VHDLILYLYKNHFFKFIEVYVQQVNPTNTPQVVAGLLDVDCDENIIKGLLASVIGRVPIK 844
Query: 241 ELVQEVEKRNRLKIVLPFLEKTLEGGSTDQEVYNTLG 277
ELV EVEKRNRLKI+LPFLEKTLEGGSTDQEV+NTL
Sbjct: 845 ELVAEVEKRNRLKILLPFLEKTLEGGSTDQEVFNTLA 881
>LELG_04774 c7 (441540..446570) [5031 bp, 1676 aa]
Length = 1676
Score = 469 bits (1208), Expect = e-154, Method: Compositional matrix adjust. Identities = 226/277 (81%), Positives = 244/277 (88%)
Query: 1 MFSHYDKPSIGKLCEKSGLFQRALEHYDDLKDIKRVVVHTNVLPNDWLVSYFGQLNVQQS 60
MFSHYDKP+IGKLCEKSGLFQRALEHYDDLKDIKRV+VHTNVLP+DWLVSYFGQLNV QS
Sbjct: 607 MFSHYDKPTIGKLCEKSGLFQRALEHYDDLKDIKRVIVHTNVLPSDWLVSYFGQLNVDQS 666
Query: 61 MACXXXXXXXXXXXXXXXXXXXATKYSDLLGPLNLIKLFETYKCNEGKYYYLSSIVNLTQ 120
+AC ATKYSDL+GP LIKLFE YKC+EG YYYLSSIVNLTQ
Sbjct: 667 IACLKELFSHNLQQNLQVIIQVATKYSDLIGPQKLIKLFEEYKCSEGLYYYLSSIVNLTQ 726
Query: 121 DPDVVFKYIEAAAKMNQTKEIERVVRDNNVYNGEKVKNFLKEFKLDDQLPLIIVCDRFNF 180
D DVVFKYI+AAA++ QTKEIERVVRDNNVYNGEKVKNFLKEFKL+DQLPL+IVCDRFNF
Sbjct: 727 DSDVVFKYIQAAARIGQTKEIERVVRDNNVYNGEKVKNFLKEFKLEDQLPLVIVCDRFNF 786
Query: 181 VHDLILYLYKNQYFKFIEVYVQQVNPANTPQVVAGLLDVDCDENIIKGLLMSVLGRVPLK 240
VHDLILYLYKNQYFKFIEVYVQ VNP+NTPQV+AGLLDVDCDE +IK LLMSVLGRVP+K
Sbjct: 787 VHDLILYLYKNQYFKFIEVYVQSVNPSNTPQVIAGLLDVDCDEAVIKNLLMSVLGRVPIK 846
Query: 241 ELVQEVEKRNRLKIVLPFLEKTLEGGSTDQEVYNTLG 277
LV+EVEKRNRLKI+LP+LEKTLEGGS DQEVYN L
Sbjct: 847 TLVEEVEKRNRLKILLPYLEKTLEGGSNDQEVYNALA 883
>CORT0F03210 c6 complement(662221..667128) [4908 bp, 1635 aa] S. cerevisiae
homolog CHC1 has role in endocytosis
Length = 1635
Score = 461 bits (1186), Expect = e-151, Method: Compositional matrix adjust. Identities = 224/277 (80%), Positives = 240/277 (86%)
Query: 1 MFSHYDKPSIGKLCEKSGLFQRALEHYDDLKDIKRVVVHTNVLPNDWLVSYFGQLNVQQS 60
MFSHYDKP+IGKLCEKSGL+QRALEHYDDLKDIKRV+VHTNVLPNDWLVSYFGQLNV QS
Sbjct: 604 MFSHYDKPTIGKLCEKSGLYQRALEHYDDLKDIKRVIVHTNVLPNDWLVSYFGQLNVDQS 663
Query: 61 MACXXXXXXXXXXXXXXXXXXXATKYSDLLGPLNLIKLFETYKCNEGKYYYLSSIVNLTQ 120
+AC ATKYSDLLG LIKLFE YKC EG YYYLSSIVNLTQ
Sbjct: 664 IACLKELFSHNLQQNLQVIIQVATKYSDLLGAKKLIKLFEEYKCTEGLYYYLSSIVNLTQ 723
Query: 121 DPDVVFKYIEAAAKMNQTKEIERVVRDNNVYNGEKVKNFLKEFKLDDQLPLIIVCDRFNF 180
DPDVVFKYI+AAAK+ QTKEIERVVRDNNVYNGEKVKNFLKE L+DQLPL+IVCDRF F
Sbjct: 724 DPDVVFKYIQAAAKIGQTKEIERVVRDNNVYNGEKVKNFLKEANLEDQLPLVIVCDRFGF 783
Query: 181 VHDLILYLYKNQYFKFIEVYVQQVNPANTPQVVAGLLDVDCDENIIKGLLMSVLGRVPLK 240
VHDLILYLYKN++FKFIEVYVQ VNP NTPQV+AGLLDVDCDE+IIK LLMSVLGRVP+K
Sbjct: 784 VHDLILYLYKNKHFKFIEVYVQSVNPENTPQVIAGLLDVDCDESIIKNLLMSVLGRVPIK 843
Query: 241 ELVQEVEKRNRLKIVLPFLEKTLEGGSTDQEVYNTLG 277
LV+EVEKRNRLKI+LP+LEKTLEGGS DQEVYN L
Sbjct: 844 PLVEEVEKRNRLKILLPYLEKTLEGGSNDQEVYNALA 880
>CPAR2_602230 Chr6 complement(521493..526400) [4908 bp, 1635 aa] S. cerevisiae
homolog CHC1 has role in endocytosis
Length = 1635
Score = 459 bits (1182), Expect = e-150, Method: Compositional matrix adjust. Identities = 222/277 (80%), Positives = 240/277 (86%)
Query: 1 MFSHYDKPSIGKLCEKSGLFQRALEHYDDLKDIKRVVVHTNVLPNDWLVSYFGQLNVQQS 60
MFSHYDKP+IGKLCEKSGL+QRALEHYDDLKDIKRV+VHTNV+PNDWLVSYFGQLNV QS
Sbjct: 604 MFSHYDKPTIGKLCEKSGLYQRALEHYDDLKDIKRVIVHTNVIPNDWLVSYFGQLNVDQS 663
Query: 61 MACXXXXXXXXXXXXXXXXXXXATKYSDLLGPLNLIKLFETYKCNEGKYYYLSSIVNLTQ 120
+AC ATKYSDLLG LIKLFE YKC EG YYYLSSIVNLTQ
Sbjct: 664 IACLKELFSHNLQQNLQVIIQVATKYSDLLGAKKLIKLFEEYKCTEGLYYYLSSIVNLTQ 723
Query: 121 DPDVVFKYIEAAAKMNQTKEIERVVRDNNVYNGEKVKNFLKEFKLDDQLPLIIVCDRFNF 180
DPDVVFKYI+AA+K+ QTKEIERVVRDNNVYNGEKVKNFLKE L+DQLPL+IVCDRF F
Sbjct: 724 DPDVVFKYIQAASKIGQTKEIERVVRDNNVYNGEKVKNFLKEANLEDQLPLVIVCDRFGF 783
Query: 181 VHDLILYLYKNQYFKFIEVYVQQVNPANTPQVVAGLLDVDCDENIIKGLLMSVLGRVPLK 240
VHDLILYLYKN++FKFIEVYVQ VNP NTPQV+AGLLDVDCDE+IIK LLMSVLGRVP+K
Sbjct: 784 VHDLILYLYKNKHFKFIEVYVQSVNPENTPQVIAGLLDVDCDESIIKNLLMSVLGRVPIK 843
Query: 241 ELVQEVEKRNRLKIVLPFLEKTLEGGSTDQEVYNTLG 277
LV+EVEKRNRLKI+LP+LEKTLEGGS DQEVYN L
Sbjct: 844 PLVEEVEKRNRLKILLPYLEKTLEGGSNDQEVYNALA 880
>YGL206C Chr7 complement(102547..107508) [4962 bp, 1653 aa] Clathrin heavy
chain, subunit of the major coat protein involved in
intracellular protein transport and endocytosis; two
heavy chains form the clathrin triskelion structural
component; the light chain (CLC1) is thought to regulate
function
Length = 1653
Score = 380 bits (975), Expect = e-121, Method: Compositional matrix adjust. Identities = 181/277 (65%), Positives = 216/277 (77%)
Query: 1 MFSHYDKPSIGKLCEKSGLFQRALEHYDDLKDIKRVVVHTNVLPNDWLVSYFGQLNVQQS 60
+FSHYDKP+I L EK+GL+QRALE+Y D+KDIKR VVHTN LP DWLV YFG+LNV+QS
Sbjct: 610 IFSHYDKPTIASLSEKAGLYQRALENYTDIKDIKRCVVHTNALPIDWLVGYFGKLNVEQS 669
Query: 61 MACXXXXXXXXXXXXXXXXXXXATKYSDLLGPLNLIKLFETYKCNEGKYYYLSSIVNLTQ 120
+AC ATK+SDL+GP LIKLFE Y EG YYYL+S+VNLT+
Sbjct: 670 LACLKALMDNNIQANIQTVVQVATKFSDLIGPSTLIKLFEDYNATEGLYYYLASLVNLTE 729
Query: 121 DPDVVFKYIEAAAKMNQTKEIERVVRDNNVYNGEKVKNFLKEFKLDDQLPLIIVCDRFNF 180
D DVV+KYIEAAAKM Q +EIER+V+DNNVY+ E+VKNFLK+ L+DQLPL+IVCDRF+F
Sbjct: 730 DKDVVYKYIEAAAKMKQYREIERIVKDNNVYDPERVKNFLKDANLEDQLPLVIVCDRFDF 789
Query: 181 VHDLILYLYKNQYFKFIEVYVQQVNPANTPQVVAGLLDVDCDENIIKGLLMSVLGRVPLK 240
VH++ILYLYK+Q KFIE YVQQVNP+ T QVV LLD+DCDE I+ LL SVLG+VP+
Sbjct: 790 VHEMILYLYKSQNLKFIETYVQQVNPSKTAQVVGALLDMDCDEAFIQSLLQSVLGQVPIN 849
Query: 241 ELVQEVEKRNRLKIVLPFLEKTLEGGSTDQEVYNTLG 277
EL EVEKRNRLKI+LPFLE++L G DQ VYN L
Sbjct: 850 ELTTEVEKRNRLKILLPFLEQSLSQGIQDQAVYNALA 886
>CPAR2_406880 Chr4 complement(1541922..1542659) [738 bp, 245 aa] S. cerevisiae
homolog YPL199C localizes to cytoplasm
Length = 245
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Query: 7 KPSIGKLCEKSGLFQRALEHYDDLKDIKRVVVHTNVLPNDWLVSYFGQLNVQQ 59
KP+I +LCE+S L+HY D K+ +V+ N + L S +GQ + Q
Sbjct: 145 KPAIAELCEESN-----LKHYIDPKNTGVLVIDLNNASSAQLPSSWGQSPITQ 192
>CTRG_05810 c10 complement(62052..64796) [2745 bp, 914 aa]
Length = 914
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust. Identities = 15/51 (29%), Positives = 29/51 (56%)
Query: 224 NIIKGLLMSVLGRVPLKELVQEVEKRNRLKIVLPFLEKTLEGGSTDQEVYN 274
N I + + PLK++ Q++++R ++ PF+ EG TD+EV++
Sbjct: 475 NWISNSFAKLENQAPLKDMKQKIKQRRLQQLQDPFVVYDNEGEETDEEVFS 525
>YCR093W Chr3 (280114..286440) [6327 bp, 2108 aa] Component of the CCR4-NOT
complex, which has multiple roles in regulating mRNA
levels including regulation of transcription and
destabilizing mRNAs by deadenylation; basal
transcription factor
Length = 2108
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust. Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 237 VPLKELVQEVEKRNRLKIVLPFLEKTLEGGS 267
+ +E++ E K NRL+IV+PF+ K L+ S
Sbjct: 903 IAFREMLIEAYKENRLEIVVPFVTKILQRAS 933
>CTRG_00917 c1 (2069681..2071888) [2208 bp, 735 aa]
Length = 735
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Query: 104 CNEGKYYYLSSIVNLTQDPD----VVFKYIEAAAKMN-QTKEIERVVRDNNVYNGEKVKN 158
C + K + NLT DPD + +Y+ + + N +IE + R+ ++ +
Sbjct: 162 CGDWKVMGFELVTNLTSDPDQPIYRLSRYMPVSWRDNCDNDDIESIRREPKKFDSYRFGK 221
Query: 159 FLKEF--KLDDQLPLIIVCDRFNFVHDLI-LYLYKNQYFKFIEVYVQQVNPANT 209
F+KE K ++Q+P + D L +QY K +E + QQ NP T
Sbjct: 222 FIKEVFEKSNNQVPAKLSTPMRRLSLDKPNLRSSASQYLKDLETWHQQ-NPVIT 274
Database: Seq/AA.fsa
Posted date: Feb 8, 2013 12:45 PM
Number of letters in database: 40,655,052
Number of sequences in database: 85,676
Lambda K H
0.321 0.140 0.407
Gapped Lambda K H 0.267 0.0410 0.140
Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 85676 Number of Hits to DB: 22,769,857 Number of extensions: 997683 Number of successful extensions: 3203 Number of sequences better than 10.0: 36 Number of HSP's gapped: 3270 Number of HSP's successfully gapped: 36 Length of query: 277 Length of database: 40,655,052 Length adjustment: 106 Effective length of query: 171 Effective length of database: 31,573,396 Effective search space: 5399050716 Effective search space used: 5399050716 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 64 (29.3 bits)